BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D05SP1|AL426355
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig992 1304 0.0
3x_Contig814 153 6e-37
>3x_Contig992
Length = 4146
Score = 1304 bits (658), Expect = 0.0
Identities = 665/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 1 tccatcaatgtgcaagaaacagatgaagagcatgaagcccgtattcacgaaacaagacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3477 tccatcaatgtgcaagaaacagatgaagagcatgaagcccgtattcacgaaacaagacgt 3536
Query: 61 tctattaagaaatatgaacaaggtattattattgcatctgaagaagaattagaagaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3537 tctattaagaaatatgaacaaggtattattattgcatctgaagaagaattagaagaagag 3596
Query: 121 cgtgaaatttatagcgagagattcgttgagtggaaagatcaatactataaagataaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3597 cgtgaaatttatagcgagagattcgttgagtggaaagatcaatactataaagataaatta 3656
Query: 181 gatttttccatcaatgatactgatagtctaaaagaaatgacagaaaactatgtcggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3657 gatttttccatcaatgatactgatagtctaaaagaaatgacagaaaactatgtcggaggt 3716
Query: 241 ttacaatgggttttatactactattatcgtggatgtccatcttggtcctggtattacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3717 ttacaatgggttttatactactattatcgtggatgtccatcttggtcctggtattacaga 3776
Query: 301 tatcattacgctcctcgtatatcagatgtgatcaaaggtatagatcagaacatagaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3777 tatcattacgctcctcgtatatcagatgtgatcaaaggtatagatcagaacatagaattt 3836
Query: 361 cacaagggacagcctttcaagcccttccaacaattgatggccgtcttgcctgagagatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3837 cacaagggacagcctttcaagcccttccaacaattgatggccgtcttgcctgagagatca 3896
Query: 421 aagaatttgattccagttgtgtacagaccactcatgtatgatgaacactctcctatcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3897 aagaatttgattccagttgtgtacagaccactcatgtatgatgaacactctcctatcttg 3956
Query: 481 gacttctatcctaacgaagtagagttggatctaaatggcaaaacagcagactgggaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3957 gacttctatcctaacgaagtagagttggatctaaatggcaaaacagcagactgggaagct 4016
Query: 541 gtcgtcaaaatttcattcgtggatcaaaagcgtttagtagaagcaatggctccttatgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4017 gtcgtcaaaatttcattcgtggatcaaaagcgtttagtagaagcaatggctccttatgat 4076
Query: 601 gctaagctttctccggatgaaaagaaaagaaattcgttcggaactgatctgattttcata 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4077 gctaagctttctccggatgaaaagaaaagaaattcgttcggaactgatctga-tttcata 4135
Query: 661 ttcaat 666
||||||
Sbjct: 4136 ttcaat 4141
>3x_Contig814
Length = 3416
Score = 153 bits (77), Expect = 6e-37
Identities = 115/121 (95%), Gaps = 5/121 (4%)
Strand = Plus / Plus
Query: 667 cctcaggtagacacagtttacaaaacaccactagcggggttgtttaatgatattgaacac 726
|||||||| ||||||||| ||||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 71 cctcaggt-gacacagtt-acaaaacaccactagcggggt-gttta-tgatat-gaacac 125
Query: 727 aatcattgtatcgaaagggaattcattccagaatcgatggaaaacgttaagttcttattt 786
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 126 aatcattgtatcgaaagggaattcattccagaatcgatggaaaacgttaaggtcttattt 185
Query: 787 g 787
|
Sbjct: 186 g 186
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7018
Number of Sequences: 1807
Number of extensions: 7018
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)